Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP11P24347 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
MMP11P24347 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.02■□□□□ 0.79
MMP11P24347 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP11P24347 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP11P24347 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.01■□□□□ 0.79
MMP11P24347 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.01■□□□□ 0.79
MMP11P24347 AP001160.3-201ENST00000601484 763 ntBASIC20.01■□□□□ 0.79
MMP11P24347 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP11P24347 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP11P24347 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20■□□□□ 0.79
MMP11P24347 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20■□□□□ 0.79
MMP11P24347 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20■□□□□ 0.79
MMP11P24347 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20■□□□□ 0.79
MMP11P24347 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20■□□□□ 0.79
MMP11P24347 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20■□□□□ 0.79
MMP11P24347 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20■□□□□ 0.79
MMP11P24347 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
MMP11P24347 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP11P24347 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP11P24347 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP11P24347 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP11P24347 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP11P24347 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.99■□□□□ 0.79
MMP11P24347 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP11P24347 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP11P24347 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MMP11P24347 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
MMP11P24347 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.99■□□□□ 0.79
MMP11P24347 MFSD11-216ENST00000590393 1141 ntBASIC19.99■□□□□ 0.79
MMP11P24347 AC010542.4-201ENST00000563151 1910 ntBASIC19.99■□□□□ 0.79
MMP11P24347 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP11P24347 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP11P24347 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.99■□□□□ 0.79
MMP11P24347 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP11P24347 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.98■□□□□ 0.79
MMP11P24347 AP006587.3-201ENST00000525742 1516 ntBASIC19.98■□□□□ 0.79
MMP11P24347 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP11P24347 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.98■□□□□ 0.79
MMP11P24347 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP11P24347 HLA-L-209ENST00000420110 1011 ntBASIC19.98■□□□□ 0.79
MMP11P24347 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.98■□□□□ 0.79
MMP11P24347 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.98■□□□□ 0.79
MMP11P24347 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.98■□□□□ 0.79
MMP11P24347 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP11P24347 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.98■□□□□ 0.79
MMP11P24347 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.98■□□□□ 0.79
MMP11P24347 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MMP11P24347 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.97■□□□□ 0.79
MMP11P24347 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.97■□□□□ 0.79
MMP11P24347 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP11P24347 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.97■□□□□ 0.79
MMP11P24347 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.97■□□□□ 0.79
MMP11P24347 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP11P24347 AC138907.5-202ENST00000569484 235 ntBASIC19.97■□□□□ 0.79
MMP11P24347 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.97■□□□□ 0.79
MMP11P24347 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.97■□□□□ 0.79
MMP11P24347 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP11P24347 AC026310.3-201ENST00000625186 2373 ntBASIC19.97■□□□□ 0.79
MMP11P24347 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP11P24347 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.96■□□□□ 0.79
MMP11P24347 FAM99A-202ENST00000538190 1989 ntBASIC19.96■□□□□ 0.79
MMP11P24347 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP11P24347 AC006970.2-201ENST00000450065 779 ntBASIC19.96■□□□□ 0.79
MMP11P24347 AC010141.2-201ENST00000452426 721 ntBASIC19.96■□□□□ 0.79
MMP11P24347 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.96■□□□□ 0.79
MMP11P24347 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.96■□□□□ 0.79
MMP11P24347 UBE2DNL-204ENST00000602536 740 ntBASIC19.96■□□□□ 0.79
MMP11P24347 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.96■□□□□ 0.79
MMP11P24347 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP11P24347 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MMP11P24347 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP11P24347 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP11P24347 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP11P24347 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.96■□□□□ 0.79
MMP11P24347 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms