Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
KCNA3P22001 PNMA6B-201ENST00000538162 1200 ntBASIC26.2■■□□□ 1.78
KCNA3P22001 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
KCNA3P22001 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.2■■□□□ 1.78
KCNA3P22001 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.19■■□□□ 1.78
KCNA3P22001 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.19■■□□□ 1.78
KCNA3P22001 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
KCNA3P22001 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNA3P22001 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.19■■□□□ 1.78
KCNA3P22001 KRT17P3-201ENST00000420566 1262 ntBASIC26.19■■□□□ 1.78
KCNA3P22001 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.19■■□□□ 1.78
KCNA3P22001 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
KCNA3P22001 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNA3P22001 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNA3P22001 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNA3P22001 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
KCNA3P22001 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.18■■□□□ 1.78
KCNA3P22001 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
KCNA3P22001 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNA3P22001 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNA3P22001 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNA3P22001 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
KCNA3P22001 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
KCNA3P22001 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.18■■□□□ 1.78
KCNA3P22001 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.18■■□□□ 1.78
KCNA3P22001 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
KCNA3P22001 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
KCNA3P22001 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNA3P22001 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.17■■□□□ 1.78
KCNA3P22001 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNA3P22001 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.17■■□□□ 1.78
KCNA3P22001 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNA3P22001 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNA3P22001 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.17■■□□□ 1.78
KCNA3P22001 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KCNA3P22001 AC061975.6-201ENST00000579045 1553 ntBASIC26.16■■□□□ 1.78
KCNA3P22001 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
KCNA3P22001 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.16■■□□□ 1.78
KCNA3P22001 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
KCNA3P22001 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
KCNA3P22001 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
KCNA3P22001 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.15■■□□□ 1.78
KCNA3P22001 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
KCNA3P22001 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.15■■□□□ 1.78
KCNA3P22001 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
KCNA3P22001 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.15■■□□□ 1.78
KCNA3P22001 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
KCNA3P22001 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
KCNA3P22001 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.15■■□□□ 1.78
KCNA3P22001 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
KCNA3P22001 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
KCNA3P22001 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.14■■□□□ 1.78
KCNA3P22001 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
KCNA3P22001 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.14■■□□□ 1.78
KCNA3P22001 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
KCNA3P22001 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.14■■□□□ 1.78
KCNA3P22001 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
KCNA3P22001 AC100791.3-201ENST00000617619 330 ntBASIC26.14■■□□□ 1.78
KCNA3P22001 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.14■■□□□ 1.78
KCNA3P22001 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
KCNA3P22001 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.13■■□□□ 1.77
KCNA3P22001 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.13■■□□□ 1.77
KCNA3P22001 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KCNA3P22001 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KCNA3P22001 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.13■■□□□ 1.77
KCNA3P22001 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.13■■□□□ 1.77
KCNA3P22001 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.13■■□□□ 1.77
KCNA3P22001 AC069544.1-201ENST00000609399 999 ntBASIC26.13■■□□□ 1.77
KCNA3P22001 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
KCNA3P22001 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
KCNA3P22001 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.13■■□□□ 1.77
KCNA3P22001 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
KCNA3P22001 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.12■■□□□ 1.77
KCNA3P22001 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.12■■□□□ 1.77
KCNA3P22001 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
KCNA3P22001 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.12■■□□□ 1.77
KCNA3P22001 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
KCNA3P22001 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.12■■□□□ 1.77
KCNA3P22001 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
KCNA3P22001 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
KCNA3P22001 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.11■■□□□ 1.77
KCNA3P22001 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.11■■□□□ 1.77
KCNA3P22001 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.11■■□□□ 1.77
KCNA3P22001 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.11■■□□□ 1.77
KCNA3P22001 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 FAM21FP-204ENST00000608637 956 ntBASIC26.11■■□□□ 1.77
KCNA3P22001 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
KCNA3P22001 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
KCNA3P22001 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
KCNA3P22001 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNA3P22001 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNA3P22001 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms