Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SRMP19623 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRMP19623 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SRMP19623 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.37■□□□□ 0.53
SRMP19623 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SRMP19623 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 AC073314.1-201ENST00000568729 2216 ntBASIC18.37■□□□□ 0.53
SRMP19623 MIR6724-1-201ENST00000616420 92 ntBASIC18.37■□□□□ 0.53
SRMP19623 MIR6724-2-201ENST00000616483 92 ntBASIC18.37■□□□□ 0.53
SRMP19623 MIR6724-4-201ENST00000617390 92 ntBASIC18.37■□□□□ 0.53
SRMP19623 MIR6724-3-201ENST00000622482 92 ntBASIC18.37■□□□□ 0.53
SRMP19623 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.37■□□□□ 0.53
SRMP19623 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SRMP19623 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 AP004607.7-201ENST00000527152 1677 ntBASIC18.37■□□□□ 0.53
SRMP19623 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.37■□□□□ 0.53
SRMP19623 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SRMP19623 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRMP19623 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SRMP19623 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.36■□□□□ 0.53
SRMP19623 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 AC099791.2-201ENST00000605725 427 ntBASIC18.36■□□□□ 0.53
SRMP19623 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.36■□□□□ 0.53
SRMP19623 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRMP19623 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SRMP19623 PLK5-205ENST00000642079 1969 ntBASIC18.35■□□□□ 0.53
SRMP19623 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SRMP19623 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SRMP19623 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.35■□□□□ 0.53
SRMP19623 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRMP19623 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.35■□□□□ 0.53
SRMP19623 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
SRMP19623 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SRMP19623 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SRMP19623 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.35■□□□□ 0.53
SRMP19623 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.35■□□□□ 0.53
SRMP19623 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRMP19623 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SRMP19623 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.35■□□□□ 0.53
SRMP19623 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.34■□□□□ 0.53
SRMP19623 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.34■□□□□ 0.53
SRMP19623 MIR3181-201ENST00000578512 73 ntBASIC18.34■□□□□ 0.53
SRMP19623 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.34■□□□□ 0.53
SRMP19623 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SRMP19623 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SRMP19623 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRMP19623 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SRMP19623 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRMP19623 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SRMP19623 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.33■□□□□ 0.53
SRMP19623 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRMP19623 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.33■□□□□ 0.53
SRMP19623 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SRMP19623 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRMP19623 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRMP19623 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRMP19623 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.33■□□□□ 0.52
SRMP19623 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms