Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.98■□□□□ 0.95
XRCC1P18887 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC1P18887 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
XRCC1P18887 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC1P18887 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC1P18887 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC1P18887 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC1P18887 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
XRCC1P18887 AP004607.4-201ENST00000530158 1459 ntBASIC20.97■□□□□ 0.95
XRCC1P18887 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC1P18887 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
XRCC1P18887 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.97■□□□□ 0.95
XRCC1P18887 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.97■□□□□ 0.95
XRCC1P18887 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.97■□□□□ 0.95
XRCC1P18887 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.97■□□□□ 0.95
XRCC1P18887 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
XRCC1P18887 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC1P18887 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC1P18887 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.97■□□□□ 0.95
XRCC1P18887 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
XRCC1P18887 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC1P18887 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC1P18887 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.96■□□□□ 0.95
XRCC1P18887 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC1P18887 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.96■□□□□ 0.95
XRCC1P18887 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.96■□□□□ 0.95
XRCC1P18887 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC1P18887 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.96■□□□□ 0.95
XRCC1P18887 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.96■□□□□ 0.95
XRCC1P18887 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.96■□□□□ 0.95
XRCC1P18887 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.96■□□□□ 0.95
XRCC1P18887 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.96■□□□□ 0.95
XRCC1P18887 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.96■□□□□ 0.95
XRCC1P18887 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.96■□□□□ 0.95
XRCC1P18887 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC1P18887 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.96■□□□□ 0.95
XRCC1P18887 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC1P18887 AP004607.7-201ENST00000527152 1677 ntBASIC20.96■□□□□ 0.95
XRCC1P18887 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
XRCC1P18887 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRCC1P18887 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRCC1P18887 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.95■□□□□ 0.94
XRCC1P18887 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.95■□□□□ 0.94
XRCC1P18887 AC079140.4-201ENST00000507448 529 ntBASIC20.95■□□□□ 0.94
XRCC1P18887 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.95■□□□□ 0.94
XRCC1P18887 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.95■□□□□ 0.94
XRCC1P18887 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.95■□□□□ 0.94
XRCC1P18887 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.95■□□□□ 0.94
XRCC1P18887 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.95■□□□□ 0.94
XRCC1P18887 IKBKGP1-201ENST00000612193 1073 ntBASIC20.95■□□□□ 0.94
XRCC1P18887 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRCC1P18887 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRCC1P18887 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRCC1P18887 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC1P18887 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC1P18887 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC1P18887 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
XRCC1P18887 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.94■□□□□ 0.94
XRCC1P18887 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
XRCC1P18887 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.94■□□□□ 0.94
XRCC1P18887 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
XRCC1P18887 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.94■□□□□ 0.94
XRCC1P18887 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.94■□□□□ 0.94
XRCC1P18887 AL034346.1-201ENST00000568244 1277 ntBASIC20.94■□□□□ 0.94
XRCC1P18887 KRT18P61-201ENST00000585825 1298 ntBASIC20.94■□□□□ 0.94
XRCC1P18887 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
XRCC1P18887 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC1P18887 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XRCC1P18887 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
XRCC1P18887 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
XRCC1P18887 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
XRCC1P18887 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.93■□□□□ 0.94
XRCC1P18887 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 AC004854.2-201ENST00000608450 1441 ntBASIC20.93■□□□□ 0.94
XRCC1P18887 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRCC1P18887 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
XRCC1P18887 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.92■□□□□ 0.94
XRCC1P18887 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.92■□□□□ 0.94
XRCC1P18887 AL137784.2-201ENST00000607332 1000 ntBASIC20.92■□□□□ 0.94
XRCC1P18887 AC092437.1-201ENST00000624794 1048 ntBASIC20.92■□□□□ 0.94
XRCC1P18887 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.92■□□□□ 0.94
XRCC1P18887 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XRCC1P18887 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.92■□□□□ 0.94
XRCC1P18887 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms