Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UBL4AP11441 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UBL4AP11441 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.46■□□□□ 0.71
UBL4AP11441 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBL4AP11441 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBL4AP11441 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
UBL4AP11441 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBL4AP11441 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBL4AP11441 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBL4AP11441 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBL4AP11441 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.45■□□□□ 0.7
UBL4AP11441 TPRG1LP1-201ENST00000598702 760 ntBASIC19.45■□□□□ 0.7
UBL4AP11441 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.45■□□□□ 0.7
UBL4AP11441 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBL4AP11441 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBL4AP11441 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.45■□□□□ 0.7
UBL4AP11441 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
UBL4AP11441 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.44■□□□□ 0.7
UBL4AP11441 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.44■□□□□ 0.7
UBL4AP11441 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UBL4AP11441 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.44■□□□□ 0.7
UBL4AP11441 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.44■□□□□ 0.7
UBL4AP11441 AC027612.3-201ENST00000413684 1047 ntBASIC19.44■□□□□ 0.7
UBL4AP11441 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
UBL4AP11441 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.44■□□□□ 0.7
UBL4AP11441 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBL4AP11441 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.43■□□□□ 0.7
UBL4AP11441 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBL4AP11441 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBL4AP11441 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.43■□□□□ 0.7
UBL4AP11441 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBL4AP11441 Z98882.1-201ENST00000622160 2253 ntBASIC19.42■□□□□ 0.7
UBL4AP11441 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.42■□□□□ 0.7
UBL4AP11441 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.42■□□□□ 0.7
UBL4AP11441 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.42■□□□□ 0.7
UBL4AP11441 ZNRF2P3-201ENST00000424200 374 ntBASIC19.42■□□□□ 0.7
UBL4AP11441 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
UBL4AP11441 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
UBL4AP11441 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBL4AP11441 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBL4AP11441 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
UBL4AP11441 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.41■□□□□ 0.7
UBL4AP11441 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.41■□□□□ 0.7
UBL4AP11441 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBL4AP11441 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.41■□□□□ 0.7
UBL4AP11441 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.41■□□□□ 0.7
UBL4AP11441 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBL4AP11441 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
UBL4AP11441 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.4■□□□□ 0.7
UBL4AP11441 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.4■□□□□ 0.7
UBL4AP11441 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.4■□□□□ 0.7
UBL4AP11441 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.4■□□□□ 0.7
UBL4AP11441 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.4■□□□□ 0.7
UBL4AP11441 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms