Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL3P10147 C11orf96-202ENST00000528572 1834 ntBASIC19.27■□□□□ 0.68
CCL3P10147 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL3P10147 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL3P10147 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL3P10147 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL3P10147 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL3P10147 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCL3P10147 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3P10147 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3P10147 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCL3P10147 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3P10147 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3P10147 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL3P10147 MIR663A-201ENST00000385250 93 ntBASIC19.26■□□□□ 0.67
CCL3P10147 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.26■□□□□ 0.67
CCL3P10147 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
CCL3P10147 AC231657.2-201ENST00000624556 255 ntBASIC19.26■□□□□ 0.67
CCL3P10147 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CCL3P10147 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCL3P10147 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.26■□□□□ 0.67
CCL3P10147 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCL3P10147 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCL3P10147 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCL3P10147 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.25■□□□□ 0.67
CCL3P10147 AC006970.2-201ENST00000450065 779 ntBASIC19.25■□□□□ 0.67
CCL3P10147 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.25■□□□□ 0.67
CCL3P10147 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL3P10147 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.25■□□□□ 0.67
CCL3P10147 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL3P10147 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL3P10147 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 ID1-201ENST00000376105 1233 ntBASIC19.24■□□□□ 0.67
CCL3P10147 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 AC007322.1-201ENST00000426983 750 ntBASIC19.24■□□□□ 0.67
CCL3P10147 CNN2P6-201ENST00000439038 900 ntBASIC19.24■□□□□ 0.67
CCL3P10147 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCL3P10147 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 EP400NL-214ENST00000641289 2402 ntBASIC19.24■□□□□ 0.67
CCL3P10147 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 KRT16P2-201ENST00000414673 1423 ntBASIC19.24■□□□□ 0.67
CCL3P10147 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL3P10147 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCL3P10147 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL3P10147 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.23■□□□□ 0.67
CCL3P10147 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CCL3P10147 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.23■□□□□ 0.67
CCL3P10147 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CCL3P10147 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL3P10147 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCL3P10147 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCL3P10147 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3P10147 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCL3P10147 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3P10147 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3P10147 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL3P10147 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.22■□□□□ 0.67
CCL3P10147 TERF1P5-201ENST00000477545 1207 ntBASIC19.22■□□□□ 0.67
CCL3P10147 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL3P10147 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCL3P10147 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3P10147 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3P10147 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3P10147 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms