Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CSF1P09603 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.16■□□□□ 0.5
CSF1P09603 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CSF1P09603 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.16■□□□□ 0.5
CSF1P09603 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CSF1P09603 C17orf82-201ENST00000623772 1530 ntBASIC18.16■□□□□ 0.5
CSF1P09603 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 AC005703.6-201ENST00000623265 1329 ntBASIC18.16■□□□□ 0.5
CSF1P09603 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CSF1P09603 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CSF1P09603 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CSF1P09603 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.15■□□□□ 0.5
CSF1P09603 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSF1P09603 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.15■□□□□ 0.5
CSF1P09603 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSF1P09603 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSF1P09603 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.15■□□□□ 0.5
CSF1P09603 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.15■□□□□ 0.5
CSF1P09603 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.15■□□□□ 0.5
CSF1P09603 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.15■□□□□ 0.5
CSF1P09603 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CSF1P09603 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CSF1P09603 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CSF1P09603 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSF1P09603 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSF1P09603 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSF1P09603 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.14■□□□□ 0.5
CSF1P09603 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CSF1P09603 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
CSF1P09603 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 AL512631.2-201ENST00000604634 923 ntBASIC18.14■□□□□ 0.49
CSF1P09603 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.14■□□□□ 0.49
CSF1P09603 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.14■□□□□ 0.49
CSF1P09603 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSF1P09603 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.13■□□□□ 0.49
CSF1P09603 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.13■□□□□ 0.49
CSF1P09603 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.13■□□□□ 0.49
CSF1P09603 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 AL049796.1-201ENST00000565336 1766 ntBASIC18.13■□□□□ 0.49
CSF1P09603 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CSF1P09603 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.13■□□□□ 0.49
CSF1P09603 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.13■□□□□ 0.49
CSF1P09603 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.13■□□□□ 0.49
CSF1P09603 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.13■□□□□ 0.49
CSF1P09603 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSF1P09603 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.13■□□□□ 0.49
CSF1P09603 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CSF1P09603 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1P09603 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1P09603 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1P09603 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
CSF1P09603 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 GABARAPL3-202ENST00000624044 1851 ntBASIC18.12■□□□□ 0.49
CSF1P09603 AC026471.6-201ENST00000622954 1905 ntBASIC18.12■□□□□ 0.49
CSF1P09603 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.12■□□□□ 0.49
CSF1P09603 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CSF1P09603 PBX2P1-201ENST00000493219 1291 ntBASIC18.12■□□□□ 0.49
CSF1P09603 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.12■□□□□ 0.49
CSF1P09603 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1P09603 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CSF1P09603 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CSF1P09603 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CSF1P09603 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.12■□□□□ 0.49
CSF1P09603 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.12■□□□□ 0.49
CSF1P09603 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1P09603 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.12■□□□□ 0.49
CSF1P09603 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1P09603 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms