Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.89■□□□□ 0.61
GYPBP06028 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
GYPBP06028 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.89■□□□□ 0.61
GYPBP06028 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.89■□□□□ 0.61
GYPBP06028 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GYPBP06028 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.89■□□□□ 0.61
GYPBP06028 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.89■□□□□ 0.61
GYPBP06028 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
GYPBP06028 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.88■□□□□ 0.61
GYPBP06028 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.88■□□□□ 0.61
GYPBP06028 AL136116.3-201ENST00000402907 1138 ntBASIC18.88■□□□□ 0.61
GYPBP06028 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GYPBP06028 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.88■□□□□ 0.61
GYPBP06028 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GYPBP06028 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GYPBP06028 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GYPBP06028 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GYPBP06028 LINC01006-201ENST00000333319 2292 ntBASIC18.87■□□□□ 0.61
GYPBP06028 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GYPBP06028 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
GYPBP06028 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.87■□□□□ 0.61
GYPBP06028 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GYPBP06028 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GYPBP06028 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
GYPBP06028 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
GYPBP06028 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
GYPBP06028 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.87■□□□□ 0.61
GYPBP06028 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.86■□□□□ 0.61
GYPBP06028 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GYPBP06028 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GYPBP06028 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.86■□□□□ 0.61
GYPBP06028 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.86■□□□□ 0.61
GYPBP06028 MIR4767-201ENST00000582827 78 ntBASIC18.86■□□□□ 0.61
GYPBP06028 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.86■□□□□ 0.61
GYPBP06028 SMUG1P1-201ENST00000590640 811 ntBASIC18.86■□□□□ 0.61
GYPBP06028 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.86■□□□□ 0.61
GYPBP06028 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.86■□□□□ 0.61
GYPBP06028 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GYPBP06028 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GYPBP06028 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.86■□□□□ 0.61
GYPBP06028 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.86■□□□□ 0.61
GYPBP06028 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GYPBP06028 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.85■□□□□ 0.61
GYPBP06028 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GYPBP06028 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GYPBP06028 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.85■□□□□ 0.61
GYPBP06028 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GYPBP06028 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.85■□□□□ 0.61
GYPBP06028 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GYPBP06028 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GYPBP06028 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.84■□□□□ 0.61
GYPBP06028 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GYPBP06028 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
GYPBP06028 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.84■□□□□ 0.61
GYPBP06028 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GYPBP06028 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.84■□□□□ 0.61
GYPBP06028 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.84■□□□□ 0.61
GYPBP06028 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GYPBP06028 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms