Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBP04114 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.35□□□□□ -0.27
APOBP04114 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.35□□□□□ -0.27
APOBP04114 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBP04114 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
APOBP04114 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOBP04114 OR7E47P-201ENST00000546390 1422 ntBASIC13.35□□□□□ -0.27
APOBP04114 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBP04114 LSM12P1-201ENST00000411836 588 ntBASIC13.34□□□□□ -0.27
APOBP04114 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.34□□□□□ -0.27
APOBP04114 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBP04114 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBP04114 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.34□□□□□ -0.27
APOBP04114 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.34□□□□□ -0.27
APOBP04114 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.34□□□□□ -0.27
APOBP04114 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBP04114 C2orf69P4-201ENST00000565394 541 ntBASIC13.34□□□□□ -0.27
APOBP04114 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBP04114 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBP04114 AC142381.3-201ENST00000568208 1670 ntBASIC13.34□□□□□ -0.27
APOBP04114 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBP04114 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 AC233702.5-201ENST00000584107 538 ntBASIC13.34□□□□□ -0.27
APOBP04114 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.34□□□□□ -0.27
APOBP04114 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBP04114 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APOBP04114 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBP04114 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 AC012618.2-201ENST00000428058 849 ntBASIC13.34□□□□□ -0.27
APOBP04114 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBP04114 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBP04114 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBP04114 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBP04114 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
APOBP04114 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOBP04114 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
APOBP04114 LINC00526-201ENST00000581067 1875 ntBASIC13.33□□□□□ -0.28
APOBP04114 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOBP04114 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
APOBP04114 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 RN7SL471P-201ENST00000580476 299 ntBASIC13.33□□□□□ -0.28
APOBP04114 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBP04114 REXO1L12P-201ENST00000622156 912 ntBASIC13.33□□□□□ -0.28
APOBP04114 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBP04114 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.33□□□□□ -0.28
APOBP04114 PNMA6B-201ENST00000538162 1200 ntBASIC13.33□□□□□ -0.28
APOBP04114 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOBP04114 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBP04114 AC053503.5-201ENST00000601508 636 ntBASIC13.33□□□□□ -0.28
APOBP04114 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 AL589743.5-201ENST00000616611 1050 ntBASIC13.33□□□□□ -0.28
APOBP04114 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBP04114 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
APOBP04114 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBP04114 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBP04114 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
APOBP04114 FAM197Y4-202ENST00000622692 608 ntBASIC13.32□□□□□ -0.28
APOBP04114 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBP04114 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBP04114 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBP04114 AL353708.3-201ENST00000610272 989 ntBASIC13.32□□□□□ -0.28
APOBP04114 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBP04114 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBP04114 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBP04114 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBP04114 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBP04114 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBP04114 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBP04114 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBP04114 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
APOBP04114 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.32□□□□□ -0.28
APOBP04114 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBP04114 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.32□□□□□ -0.28
APOBP04114 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBP04114 ANOS2P-203ENST00000472227 1816 ntBASIC13.31□□□□□ -0.28
APOBP04114 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
APOBP04114 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC13.31□□□□□ -0.28
APOBP04114 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms