Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV12-3P01733 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV12-3P01733 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV12-3P01733 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV12-3P01733 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV12-3P01733 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV12-3P01733 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV12-3P01733 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV12-3P01733 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV12-3P01733 AC244015.2-201ENST00000616358 1861 ntBASIC16.32■□□□□ 0.2
TRBV12-3P01733 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV12-3P01733 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV12-3P01733 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV12-3P01733 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 AC053503.5-201ENST00000601508 636 ntBASIC16.3■□□□□ 0.2
TRBV12-3P01733 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV12-3P01733 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV12-3P01733 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 Z98882.1-201ENST00000622160 2253 ntBASIC16.29■□□□□ 0.2
TRBV12-3P01733 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV12-3P01733 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV12-3P01733 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV12-3P01733 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRBV12-3P01733 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV12-3P01733 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV12-3P01733 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.28■□□□□ 0.2
TRBV12-3P01733 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRBV12-3P01733 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRBV12-3P01733 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV12-3P01733 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV12-3P01733 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV12-3P01733 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV12-3P01733 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV12-3P01733 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV12-3P01733 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV12-3P01733 AC007375.3-201ENST00000600936 2314 ntBASIC16.27■□□□□ 0.2
TRBV12-3P01733 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms