Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.6■■□□□ 1.05
MT-CO1P00395 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.6■■□□□ 1.05
MT-CO1P00395 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.6■■□□□ 1.05
MT-CO1P00395 AC138907.5-202ENST00000569484 235 ntBASIC21.6■■□□□ 1.05
MT-CO1P00395 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.6■■□□□ 1.05
MT-CO1P00395 AC053503.5-201ENST00000601508 636 ntBASIC21.6■■□□□ 1.05
MT-CO1P00395 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-CO1P00395 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-CO1P00395 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.6■■□□□ 1.05
MT-CO1P00395 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-CO1P00395 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-CO1P00395 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
MT-CO1P00395 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.59■■□□□ 1.05
MT-CO1P00395 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.59■■□□□ 1.05
MT-CO1P00395 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.59■■□□□ 1.05
MT-CO1P00395 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.59■■□□□ 1.05
MT-CO1P00395 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-CO1P00395 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-CO1P00395 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-CO1P00395 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
MT-CO1P00395 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-CO1P00395 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.58■■□□□ 1.05
MT-CO1P00395 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-CO1P00395 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-CO1P00395 AC010141.2-201ENST00000452426 721 ntBASIC21.58■■□□□ 1.05
MT-CO1P00395 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MT-CO1P00395 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-CO1P00395 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-CO1P00395 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.57■■□□□ 1.04
MT-CO1P00395 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.57■■□□□ 1.04
MT-CO1P00395 AC090192.1-201ENST00000517740 490 ntBASIC21.57■■□□□ 1.04
MT-CO1P00395 UBE2DNL-204ENST00000602536 740 ntBASIC21.57■■□□□ 1.04
MT-CO1P00395 AC080038.1-201ENST00000611274 1154 ntBASIC21.57■■□□□ 1.04
MT-CO1P00395 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MT-CO1P00395 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MT-CO1P00395 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-CO1P00395 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.56■■□□□ 1.04
MT-CO1P00395 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.56■■□□□ 1.04
MT-CO1P00395 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.56■■□□□ 1.04
MT-CO1P00395 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MT-CO1P00395 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-CO1P00395 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-CO1P00395 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-CO1P00395 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 AC011767.1-201ENST00000617410 1153 ntBASIC21.56■■□□□ 1.04
MT-CO1P00395 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-CO1P00395 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-CO1P00395 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.55■■□□□ 1.04
MT-CO1P00395 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-CO1P00395 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.55■■□□□ 1.04
MT-CO1P00395 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-CO1P00395 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.55■■□□□ 1.04
MT-CO1P00395 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.55■■□□□ 1.04
MT-CO1P00395 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
MT-CO1P00395 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-CO1P00395 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.55■■□□□ 1.04
MT-CO1P00395 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.55■■□□□ 1.04
MT-CO1P00395 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-CO1P00395 BID-214ENST00000617586 542 ntTSL 5 BASIC21.55■■□□□ 1.04
MT-CO1P00395 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
MT-CO1P00395 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.55■■□□□ 1.04
MT-CO1P00395 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-CO1P00395 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-CO1P00395 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.55■■□□□ 1.04
MT-CO1P00395 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-CO1P00395 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
MT-CO1P00395 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MT-CO1P00395 AC007375.3-201ENST00000600936 2314 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms