Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TOP3BO95985 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TOP3BO95985 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TOP3BO95985 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.56■■□□□ 1.04
TOP3BO95985 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.56■■□□□ 1.04
TOP3BO95985 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TOP3BO95985 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.56■■□□□ 1.04
TOP3BO95985 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TOP3BO95985 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.56■■□□□ 1.04
TOP3BO95985 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TOP3BO95985 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.56■■□□□ 1.04
TOP3BO95985 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TOP3BO95985 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.56■■□□□ 1.04
TOP3BO95985 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TOP3BO95985 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.55■■□□□ 1.04
TOP3BO95985 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TOP3BO95985 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TOP3BO95985 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.55■■□□□ 1.04
TOP3BO95985 AC093827.2-201ENST00000512654 315 ntBASIC21.55■■□□□ 1.04
TOP3BO95985 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.55■■□□□ 1.04
TOP3BO95985 MIR4651-201ENST00000582622 73 ntBASIC21.55■■□□□ 1.04
TOP3BO95985 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TOP3BO95985 AF106564.1-201ENST00000607058 2553 ntBASIC21.54■■□□□ 1.04
TOP3BO95985 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TOP3BO95985 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TOP3BO95985 GPX1P1-201ENST00000388829 606 ntBASIC21.54■■□□□ 1.04
TOP3BO95985 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TOP3BO95985 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TOP3BO95985 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.54■■□□□ 1.04
TOP3BO95985 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.54■■□□□ 1.04
TOP3BO95985 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TOP3BO95985 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.53■■□□□ 1.04
TOP3BO95985 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.53■■□□□ 1.04
TOP3BO95985 AC026471.6-201ENST00000622954 1905 ntBASIC21.53■■□□□ 1.04
TOP3BO95985 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TOP3BO95985 AP004607.4-201ENST00000530158 1459 ntBASIC21.53■■□□□ 1.04
TOP3BO95985 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOP3BO95985 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TOP3BO95985 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.53■■□□□ 1.04
TOP3BO95985 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOP3BO95985 AC004854.2-201ENST00000608450 1441 ntBASIC21.53■■□□□ 1.04
TOP3BO95985 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
TOP3BO95985 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TOP3BO95985 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.52■■□□□ 1.04
TOP3BO95985 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TOP3BO95985 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.52■■□□□ 1.04
TOP3BO95985 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.52■■□□□ 1.04
TOP3BO95985 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.52■■□□□ 1.04
TOP3BO95985 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.52■■□□□ 1.04
TOP3BO95985 AC105233.4-201ENST00000642045 216 ntBASIC21.52■■□□□ 1.04
TOP3BO95985 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TOP3BO95985 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TOP3BO95985 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.52■■□□□ 1.04
TOP3BO95985 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
TOP3BO95985 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TOP3BO95985 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TOP3BO95985 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TOP3BO95985 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
TOP3BO95985 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TOP3BO95985 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TOP3BO95985 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TOP3BO95985 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP3BO95985 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
TOP3BO95985 KRT18P6-201ENST00000555540 1265 ntBASIC21.51■■□□□ 1.03
TOP3BO95985 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TOP3BO95985 AC244015.2-201ENST00000616358 1861 ntBASIC21.51■■□□□ 1.03
TOP3BO95985 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.51■■□□□ 1.03
TOP3BO95985 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TOP3BO95985 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP3BO95985 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP3BO95985 AC133637.1-201ENST00000624115 1537 ntBASIC21.5■■□□□ 1.03
TOP3BO95985 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP3BO95985 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.5■■□□□ 1.03
TOP3BO95985 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP3BO95985 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TOP3BO95985 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP3BO95985 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TOP3BO95985 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP3BO95985 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.5■■□□□ 1.03
TOP3BO95985 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.5■■□□□ 1.03
TOP3BO95985 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
TOP3BO95985 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP3BO95985 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.5■■□□□ 1.03
TOP3BO95985 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP3BO95985 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP3BO95985 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TOP3BO95985 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TOP3BO95985 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TOP3BO95985 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TOP3BO95985 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TOP3BO95985 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.49■■□□□ 1.03
TOP3BO95985 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.49■■□□□ 1.03
TOP3BO95985 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms