Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNOT4O95628 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT4O95628 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT4O95628 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT4O95628 AP001160.3-201ENST00000601484 763 ntBASIC18.69■□□□□ 0.58
CNOT4O95628 GUSBP5-202ENST00000510805 1989 ntBASIC18.69■□□□□ 0.58
CNOT4O95628 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT4O95628 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT4O95628 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CNOT4O95628 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT4O95628 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT4O95628 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT4O95628 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CNOT4O95628 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT4O95628 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT4O95628 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT4O95628 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT4O95628 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT4O95628 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT4O95628 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.67■□□□□ 0.58
CNOT4O95628 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 SLC7A5P1-201ENST00000568957 537 ntBASIC18.67■□□□□ 0.58
CNOT4O95628 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.67■□□□□ 0.58
CNOT4O95628 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.67■□□□□ 0.58
CNOT4O95628 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT4O95628 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CNOT4O95628 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT4O95628 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT4O95628 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CNOT4O95628 ECEL1P1-201ENST00000373592 1742 ntBASIC18.66■□□□□ 0.58
CNOT4O95628 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT4O95628 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CNOT4O95628 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.66■□□□□ 0.58
CNOT4O95628 AC003102.1-202ENST00000563394 1796 ntBASIC18.66■□□□□ 0.58
CNOT4O95628 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT4O95628 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT4O95628 POU5F1P4-201ENST00000413175 1085 ntBASIC18.66■□□□□ 0.58
CNOT4O95628 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT4O95628 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.66■□□□□ 0.58
CNOT4O95628 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.66■□□□□ 0.58
CNOT4O95628 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT4O95628 AC008175.2-201ENST00000612840 297 ntBASIC18.66■□□□□ 0.58
CNOT4O95628 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT4O95628 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT4O95628 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT4O95628 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT4O95628 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT4O95628 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT4O95628 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.65■□□□□ 0.58
CNOT4O95628 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT4O95628 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNOT4O95628 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNOT4O95628 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.65■□□□□ 0.58
CNOT4O95628 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT4O95628 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.65■□□□□ 0.58
CNOT4O95628 BID-214ENST00000617586 542 ntTSL 5 BASIC18.65■□□□□ 0.58
CNOT4O95628 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT4O95628 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT4O95628 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT4O95628 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CNOT4O95628 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.64■□□□□ 0.58
CNOT4O95628 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.64■□□□□ 0.58
CNOT4O95628 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.64■□□□□ 0.57
CNOT4O95628 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.64■□□□□ 0.57
CNOT4O95628 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.64■□□□□ 0.57
CNOT4O95628 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.64■□□□□ 0.57
CNOT4O95628 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms