Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
CBX6O95503 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 AC091305.1-201ENST00000479476 895 ntBASIC20.91■□□□□ 0.94
CBX6O95503 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.91■□□□□ 0.94
CBX6O95503 AP001330.3-201ENST00000520123 633 ntBASIC20.91■□□□□ 0.94
CBX6O95503 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX6O95503 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX6O95503 AC026471.6-201ENST00000622954 1905 ntBASIC20.91■□□□□ 0.94
CBX6O95503 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX6O95503 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX6O95503 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX6O95503 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX6O95503 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX6O95503 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CBX6O95503 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX6O95503 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
CBX6O95503 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX6O95503 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX6O95503 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.9■□□□□ 0.94
CBX6O95503 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CBX6O95503 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.89■□□□□ 0.94
CBX6O95503 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CBX6O95503 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
CBX6O95503 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX6O95503 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CBX6O95503 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX6O95503 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX6O95503 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CBX6O95503 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.89■□□□□ 0.93
CBX6O95503 AC009086.3-201ENST00000623486 1008 ntBASIC20.89■□□□□ 0.93
CBX6O95503 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX6O95503 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX6O95503 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX6O95503 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CBX6O95503 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX6O95503 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CBX6O95503 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX6O95503 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX6O95503 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX6O95503 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX6O95503 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CBX6O95503 PCDHAC2-203ENST00000615316 3011 ntBASIC20.88■□□□□ 0.93
CBX6O95503 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX6O95503 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CBX6O95503 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX6O95503 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX6O95503 FP325331.1-202ENST00000623531 1380 ntBASIC20.87■□□□□ 0.93
CBX6O95503 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX6O95503 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.87■□□□□ 0.93
CBX6O95503 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX6O95503 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX6O95503 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX6O95503 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
CBX6O95503 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX6O95503 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CBX6O95503 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CBX6O95503 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.86■□□□□ 0.93
CBX6O95503 AC004687.1-201ENST00000579003 1625 ntBASIC20.86■□□□□ 0.93
CBX6O95503 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX6O95503 SYT6-210ENST00000641643 1587 ntBASIC20.86■□□□□ 0.93
CBX6O95503 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX6O95503 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CBX6O95503 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.86■□□□□ 0.93
CBX6O95503 AC087623.3-201ENST00000607047 1098 ntBASIC20.86■□□□□ 0.93
CBX6O95503 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CBX6O95503 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX6O95503 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX6O95503 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms