Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.15■□□□□ 0.98
RFPL1O75677 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.15■□□□□ 0.98
RFPL1O75677 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.15■□□□□ 0.98
RFPL1O75677 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
RFPL1O75677 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.15■□□□□ 0.98
RFPL1O75677 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFPL1O75677 AP004607.7-201ENST00000527152 1677 ntBASIC21.15■□□□□ 0.98
RFPL1O75677 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RFPL1O75677 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFPL1O75677 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL1O75677 AL034346.1-201ENST00000568244 1277 ntBASIC21.14■□□□□ 0.97
RFPL1O75677 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL1O75677 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
RFPL1O75677 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL1O75677 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL1O75677 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RFPL1O75677 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL1O75677 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.14■□□□□ 0.97
RFPL1O75677 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.13■□□□□ 0.97
RFPL1O75677 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.13■□□□□ 0.97
RFPL1O75677 AC136469.2-201ENST00000623944 1028 ntBASIC21.13■□□□□ 0.97
RFPL1O75677 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.13■□□□□ 0.97
RFPL1O75677 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RFPL1O75677 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL1O75677 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.12■□□□□ 0.97
RFPL1O75677 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 FEM1AP1-201ENST00000431297 1995 ntBASIC21.12■□□□□ 0.97
RFPL1O75677 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.12■□□□□ 0.97
RFPL1O75677 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.12■□□□□ 0.97
RFPL1O75677 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL1O75677 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL1O75677 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL1O75677 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL1O75677 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL1O75677 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RFPL1O75677 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.11■□□□□ 0.97
RFPL1O75677 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.11■□□□□ 0.97
RFPL1O75677 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.11■□□□□ 0.97
RFPL1O75677 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL1O75677 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL1O75677 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.1■□□□□ 0.97
RFPL1O75677 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL1O75677 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.1■□□□□ 0.97
RFPL1O75677 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.1■□□□□ 0.97
RFPL1O75677 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.1■□□□□ 0.97
RFPL1O75677 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL1O75677 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RFPL1O75677 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.1■□□□□ 0.97
RFPL1O75677 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.1■□□□□ 0.97
RFPL1O75677 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.1■□□□□ 0.97
RFPL1O75677 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL1O75677 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL1O75677 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.09■□□□□ 0.97
RFPL1O75677 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL1O75677 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL1O75677 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL1O75677 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.09■□□□□ 0.97
RFPL1O75677 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL1O75677 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL1O75677 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL1O75677 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL1O75677 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms