Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.98■□□□□ 0.79
SCN2BO60939 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.98■□□□□ 0.79
SCN2BO60939 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.98■□□□□ 0.79
SCN2BO60939 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
SCN2BO60939 IGHV3-19-201ENST00000521488 291 ntBASIC19.98■□□□□ 0.79
SCN2BO60939 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.98■□□□□ 0.79
SCN2BO60939 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SCN2BO60939 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SCN2BO60939 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.98■□□□□ 0.79
SCN2BO60939 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN2BO60939 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN2BO60939 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SCN2BO60939 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN2BO60939 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN2BO60939 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SCN2BO60939 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SCN2BO60939 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.97■□□□□ 0.79
SCN2BO60939 AC135279.3-201ENST00000610945 1311 ntBASIC19.97■□□□□ 0.79
SCN2BO60939 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
SCN2BO60939 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN2BO60939 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SCN2BO60939 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 AL157384.1-201ENST00000445995 2473 ntBASIC19.96■□□□□ 0.79
SCN2BO60939 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN2BO60939 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
SCN2BO60939 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN2BO60939 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN2BO60939 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN2BO60939 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN2BO60939 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN2BO60939 AC055733.4-201ENST00000638462 1354 ntBASIC19.95■□□□□ 0.79
SCN2BO60939 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SCN2BO60939 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN2BO60939 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.95■□□□□ 0.78
SCN2BO60939 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SCN2BO60939 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN2BO60939 AC126544.1-201ENST00000580842 1059 ntBASIC19.95■□□□□ 0.78
SCN2BO60939 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.95■□□□□ 0.78
SCN2BO60939 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN2BO60939 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SCN2BO60939 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.95■□□□□ 0.78
SCN2BO60939 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN2BO60939 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN2BO60939 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SCN2BO60939 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN2BO60939 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.94■□□□□ 0.78
SCN2BO60939 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
SCN2BO60939 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN2BO60939 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN2BO60939 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.93■□□□□ 0.78
SCN2BO60939 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
SCN2BO60939 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
SCN2BO60939 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms