Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ZIC3O60481 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
ZIC3O60481 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 MFSD11-216ENST00000590393 1141 ntBASIC19.05■□□□□ 0.64
ZIC3O60481 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.05■□□□□ 0.64
ZIC3O60481 RARRES2P11-201ENST00000635158 484 ntBASIC19.05■□□□□ 0.64
ZIC3O60481 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ZIC3O60481 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZIC3O60481 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
ZIC3O60481 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.04■□□□□ 0.64
ZIC3O60481 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.04■□□□□ 0.64
ZIC3O60481 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.04■□□□□ 0.64
ZIC3O60481 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZIC3O60481 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ZIC3O60481 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.04■□□□□ 0.64
ZIC3O60481 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
ZIC3O60481 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
ZIC3O60481 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.03■□□□□ 0.64
ZIC3O60481 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.03■□□□□ 0.64
ZIC3O60481 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.03■□□□□ 0.64
ZIC3O60481 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.03■□□□□ 0.64
ZIC3O60481 AC120498.10-201ENST00000621827 505 ntBASIC19.03■□□□□ 0.64
ZIC3O60481 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.03■□□□□ 0.64
ZIC3O60481 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.03■□□□□ 0.64
ZIC3O60481 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.03■□□□□ 0.64
ZIC3O60481 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.03■□□□□ 0.64
ZIC3O60481 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZIC3O60481 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZIC3O60481 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ZIC3O60481 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ZIC3O60481 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.02■□□□□ 0.64
ZIC3O60481 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 CDCA4P2-201ENST00000441182 718 ntBASIC19.02■□□□□ 0.64
ZIC3O60481 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.02■□□□□ 0.64
ZIC3O60481 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.02■□□□□ 0.64
ZIC3O60481 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.02■□□□□ 0.64
ZIC3O60481 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZIC3O60481 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZIC3O60481 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZIC3O60481 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.02■□□□□ 0.63
ZIC3O60481 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.02■□□□□ 0.63
ZIC3O60481 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZIC3O60481 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 FBXW4P1-201ENST00000426721 2239 ntBASIC19.01■□□□□ 0.63
ZIC3O60481 KRT16P2-201ENST00000414673 1423 ntBASIC19.01■□□□□ 0.63
ZIC3O60481 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
ZIC3O60481 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.01■□□□□ 0.63
ZIC3O60481 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.01■□□□□ 0.63
ZIC3O60481 DUX4L16-201ENST00000555130 1264 ntBASIC19.01■□□□□ 0.63
ZIC3O60481 RAP2CP1-201ENST00000605103 478 ntBASIC19.01■□□□□ 0.63
ZIC3O60481 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.01■□□□□ 0.63
ZIC3O60481 AC073111.5-205ENST00000641717 521 ntBASIC19.01■□□□□ 0.63
ZIC3O60481 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
ZIC3O60481 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
ZIC3O60481 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZIC3O60481 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms