Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GDF9O60383 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF9O60383 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
GDF9O60383 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
GDF9O60383 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GDF9O60383 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF9O60383 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.71■□□□□ 0.91
GDF9O60383 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GDF9O60383 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.71■□□□□ 0.91
GDF9O60383 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.71■□□□□ 0.91
GDF9O60383 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.71■□□□□ 0.91
GDF9O60383 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.71■□□□□ 0.91
GDF9O60383 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.71■□□□□ 0.91
GDF9O60383 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF9O60383 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF9O60383 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF9O60383 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF9O60383 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.7■□□□□ 0.9
GDF9O60383 KRT17P3-201ENST00000420566 1262 ntBASIC20.7■□□□□ 0.9
GDF9O60383 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF9O60383 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.7■□□□□ 0.9
GDF9O60383 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.7■□□□□ 0.9
GDF9O60383 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF9O60383 AC008175.2-201ENST00000612840 297 ntBASIC20.7■□□□□ 0.9
GDF9O60383 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.7■□□□□ 0.9
GDF9O60383 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF9O60383 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF9O60383 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
GDF9O60383 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF9O60383 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF9O60383 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.69■□□□□ 0.9
GDF9O60383 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.69■□□□□ 0.9
GDF9O60383 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF9O60383 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF9O60383 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF9O60383 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF9O60383 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF9O60383 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF9O60383 HLA-B-256ENST00000639848 1089 ntBASIC20.69■□□□□ 0.9
GDF9O60383 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
GDF9O60383 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.68■□□□□ 0.9
GDF9O60383 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.68■□□□□ 0.9
GDF9O60383 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.68■□□□□ 0.9
GDF9O60383 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 AC133561.5-201ENST00000635547 218 ntBASIC20.68■□□□□ 0.9
GDF9O60383 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
GDF9O60383 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF9O60383 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.68■□□□□ 0.9
GDF9O60383 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 ANOS2P-203ENST00000472227 1816 ntBASIC20.67■□□□□ 0.9
GDF9O60383 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF9O60383 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.67■□□□□ 0.9
GDF9O60383 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF9O60383 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
GDF9O60383 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF9O60383 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF9O60383 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.67■□□□□ 0.9
GDF9O60383 AP006587.3-201ENST00000525742 1516 ntBASIC20.67■□□□□ 0.9
GDF9O60383 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF9O60383 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF9O60383 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GDF9O60383 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF9O60383 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.66■□□□□ 0.9
GDF9O60383 TSPY7P-201ENST00000431358 1114 ntBASIC20.66■□□□□ 0.9
GDF9O60383 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.66■□□□□ 0.9
GDF9O60383 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF9O60383 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
GDF9O60383 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.66■□□□□ 0.9
GDF9O60383 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.66■□□□□ 0.9
GDF9O60383 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF9O60383 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.66■□□□□ 0.9
GDF9O60383 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GDF9O60383 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF9O60383 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.66■□□□□ 0.9
GDF9O60383 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
GDF9O60383 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GDF9O60383 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF9O60383 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GDF9O60383 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF9O60383 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF9O60383 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.65■□□□□ 0.9
GDF9O60383 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF9O60383 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GDF9O60383 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.65■□□□□ 0.9
GDF9O60383 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms