Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
PCDHGA12O60330 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHGA12O60330 CYP2T1P-201ENST00000432607 1285 ntBASIC20.88■□□□□ 0.93
PCDHGA12O60330 OR10C1-204ENST00000622521 1039 ntBASIC20.88■□□□□ 0.93
PCDHGA12O60330 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA12O60330 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHGA12O60330 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 GUSBP5-202ENST00000510805 1989 ntBASIC20.87■□□□□ 0.93
PCDHGA12O60330 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGA12O60330 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGA12O60330 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHGA12O60330 MIPEPP3-201ENST00000412105 444 ntBASIC20.87■□□□□ 0.93
PCDHGA12O60330 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 ITM2C-210ENST00000620962 501 ntBASIC20.87■□□□□ 0.93
PCDHGA12O60330 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDHGA12O60330 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHGA12O60330 MKRN4P-201ENST00000444706 1521 ntBASIC20.87■□□□□ 0.93
PCDHGA12O60330 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 OR7E47P-201ENST00000546390 1422 ntBASIC20.87■□□□□ 0.93
PCDHGA12O60330 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA12O60330 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.86■□□□□ 0.93
PCDHGA12O60330 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA12O60330 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA12O60330 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA12O60330 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA12O60330 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGA12O60330 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGA12O60330 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA12O60330 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA12O60330 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA12O60330 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHGA12O60330 AL512625.2-201ENST00000417533 625 ntBASIC20.85■□□□□ 0.93
PCDHGA12O60330 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA12O60330 AC008687.6-201ENST00000596318 630 ntBASIC20.85■□□□□ 0.93
PCDHGA12O60330 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGA12O60330 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 AC093827.2-201ENST00000512654 315 ntBASIC20.84■□□□□ 0.93
PCDHGA12O60330 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 AC092118.2-201ENST00000613495 667 ntBASIC20.84■□□□□ 0.93
PCDHGA12O60330 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA12O60330 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGA12O60330 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHGA12O60330 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms