Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.34■□□□□ 0.21
PDE6DO43924 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6DO43924 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6DO43924 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6DO43924 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6DO43924 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.33■□□□□ 0.21
PDE6DO43924 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PDE6DO43924 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDE6DO43924 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.33■□□□□ 0.21
PDE6DO43924 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
PDE6DO43924 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDE6DO43924 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6DO43924 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 KRT18P24-201ENST00000344739 1156 ntBASIC16.33■□□□□ 0.2
PDE6DO43924 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6DO43924 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.33■□□□□ 0.2
PDE6DO43924 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PDE6DO43924 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PDE6DO43924 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6DO43924 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.33■□□□□ 0.2
PDE6DO43924 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6DO43924 AL020996.1-203ENST00000536896 2307 ntBASIC16.33■□□□□ 0.2
PDE6DO43924 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDE6DO43924 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.32■□□□□ 0.2
PDE6DO43924 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDE6DO43924 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.32■□□□□ 0.2
PDE6DO43924 AC079089.2-201ENST00000531211 1277 ntBASIC16.32■□□□□ 0.2
PDE6DO43924 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PDE6DO43924 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6DO43924 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDE6DO43924 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.31■□□□□ 0.2
PDE6DO43924 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 AC087289.5-201ENST00000586076 3175 ntBASIC16.31■□□□□ 0.2
PDE6DO43924 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6DO43924 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PDE6DO43924 OR7E47P-201ENST00000546390 1422 ntBASIC16.31■□□□□ 0.2
PDE6DO43924 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 SNX5-217ENST00000606557 1087 ntBASIC16.31■□□□□ 0.2
PDE6DO43924 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDE6DO43924 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 PCDHAC2-203ENST00000615316 3011 ntBASIC16.31■□□□□ 0.2
PDE6DO43924 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PDE6DO43924 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.31■□□□□ 0.2
PDE6DO43924 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6DO43924 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6DO43924 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDE6DO43924 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6DO43924 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 AC005703.6-201ENST00000623265 1329 ntBASIC16.3■□□□□ 0.2
PDE6DO43924 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PDE6DO43924 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PDE6DO43924 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.3■□□□□ 0.2
PDE6DO43924 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6DO43924 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDE6DO43924 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms