Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
SSNA1O43805 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSNA1O43805 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSNA1O43805 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SSNA1O43805 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.95■□□□□ 0.46
SSNA1O43805 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.95■□□□□ 0.46
SSNA1O43805 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.95■□□□□ 0.46
SSNA1O43805 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SSNA1O43805 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
SSNA1O43805 AC073314.1-201ENST00000568729 2216 ntBASIC17.95■□□□□ 0.46
SSNA1O43805 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.95■□□□□ 0.46
SSNA1O43805 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 LINC01529-204ENST00000636474 1715 ntBASIC17.95■□□□□ 0.46
SSNA1O43805 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
SSNA1O43805 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.95■□□□□ 0.46
SSNA1O43805 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSNA1O43805 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.95■□□□□ 0.46
SSNA1O43805 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SSNA1O43805 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSNA1O43805 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSNA1O43805 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSNA1O43805 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSNA1O43805 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SSNA1O43805 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSNA1O43805 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSNA1O43805 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSNA1O43805 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.94■□□□□ 0.46
SSNA1O43805 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.93■□□□□ 0.46
SSNA1O43805 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SSNA1O43805 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SSNA1O43805 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.93■□□□□ 0.46
SSNA1O43805 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 AL049796.1-201ENST00000565336 1766 ntBASIC17.93■□□□□ 0.46
SSNA1O43805 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SSNA1O43805 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.93■□□□□ 0.46
SSNA1O43805 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.93■□□□□ 0.46
SSNA1O43805 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SSNA1O43805 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.93■□□□□ 0.46
SSNA1O43805 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSNA1O43805 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SSNA1O43805 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.92■□□□□ 0.46
SSNA1O43805 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSNA1O43805 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.92■□□□□ 0.46
SSNA1O43805 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SSNA1O43805 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSNA1O43805 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSNA1O43805 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSNA1O43805 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSNA1O43805 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.92■□□□□ 0.46
SSNA1O43805 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSNA1O43805 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSNA1O43805 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSNA1O43805 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SSNA1O43805 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.91■□□□□ 0.46
SSNA1O43805 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SSNA1O43805 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.91■□□□□ 0.46
SSNA1O43805 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SSNA1O43805 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSNA1O43805 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.91■□□□□ 0.46
SSNA1O43805 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.91■□□□□ 0.46
SSNA1O43805 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SSNA1O43805 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SSNA1O43805 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSNA1O43805 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SSNA1O43805 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.9■□□□□ 0.46
SSNA1O43805 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSNA1O43805 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSNA1O43805 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSNA1O43805 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms