Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.12■■□□□ 1.29
CCP110O43303 AL499627.2-201ENST00000606283 725 ntBASIC23.12■■□□□ 1.29
CCP110O43303 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.12■■□□□ 1.29
CCP110O43303 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.12■■□□□ 1.29
CCP110O43303 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CCP110O43303 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.11■■□□□ 1.29
CCP110O43303 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.11■■□□□ 1.29
CCP110O43303 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
CCP110O43303 AC131212.1-201ENST00000613771 668 ntBASIC23.11■■□□□ 1.29
CCP110O43303 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCP110O43303 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.11■■□□□ 1.29
CCP110O43303 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCP110O43303 AC007952.6-201ENST00000573168 2673 ntBASIC23.1■■□□□ 1.29
CCP110O43303 AC003957.1-201ENST00000625108 2673 ntBASIC23.1■■□□□ 1.29
CCP110O43303 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCP110O43303 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCP110O43303 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCP110O43303 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CCP110O43303 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCP110O43303 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
CCP110O43303 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCP110O43303 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.1■■□□□ 1.29
CCP110O43303 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.1■■□□□ 1.29
CCP110O43303 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CCP110O43303 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.09■■□□□ 1.29
CCP110O43303 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.09■■□□□ 1.29
CCP110O43303 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.09■■□□□ 1.29
CCP110O43303 AL049796.1-201ENST00000565336 1766 ntBASIC23.09■■□□□ 1.29
CCP110O43303 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.09■■□□□ 1.29
CCP110O43303 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.09■■□□□ 1.29
CCP110O43303 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CCP110O43303 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.09■■□□□ 1.29
CCP110O43303 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.09■■□□□ 1.29
CCP110O43303 pRNA.6-201ENST00000610482 90 ntBASIC23.09■■□□□ 1.29
CCP110O43303 pRNA.5-201ENST00000612139 90 ntBASIC23.09■■□□□ 1.29
CCP110O43303 pRNA.11-201ENST00000618423 90 ntBASIC23.09■■□□□ 1.29
CCP110O43303 pRNA.13-201ENST00000619112 90 ntBASIC23.09■■□□□ 1.29
CCP110O43303 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCP110O43303 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.09■■□□□ 1.29
CCP110O43303 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
CCP110O43303 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.08■■□□□ 1.29
CCP110O43303 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCP110O43303 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CCP110O43303 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCP110O43303 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CCP110O43303 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCP110O43303 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCP110O43303 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.08■■□□□ 1.29
CCP110O43303 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.08■■□□□ 1.29
CCP110O43303 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCP110O43303 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCP110O43303 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.08■■□□□ 1.29
CCP110O43303 GABARAPL3-202ENST00000624044 1851 ntBASIC23.08■■□□□ 1.29
CCP110O43303 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCP110O43303 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CCP110O43303 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.08■■□□□ 1.28
CCP110O43303 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CCP110O43303 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
CCP110O43303 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCP110O43303 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCP110O43303 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CCP110O43303 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCP110O43303 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.07■■□□□ 1.28
CCP110O43303 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.07■■□□□ 1.28
CCP110O43303 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCP110O43303 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.07■■□□□ 1.28
CCP110O43303 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCP110O43303 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCP110O43303 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.06■■□□□ 1.28
CCP110O43303 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCP110O43303 AC026471.6-201ENST00000622954 1905 ntBASIC23.06■■□□□ 1.28
CCP110O43303 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.06■■□□□ 1.28
CCP110O43303 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCP110O43303 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.06■■□□□ 1.28
CCP110O43303 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCP110O43303 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.06■■□□□ 1.28
CCP110O43303 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCP110O43303 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCP110O43303 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms