Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 AL355472.2-201ENST00000422958 438 ntBASIC19.57■□□□□ 0.72
NKX2-8O15522 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.57■□□□□ 0.72
NKX2-8O15522 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-8O15522 AC073648.6-201ENST00000641589 218 ntBASIC19.57■□□□□ 0.72
NKX2-8O15522 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
NKX2-8O15522 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NKX2-8O15522 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-8O15522 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.56■□□□□ 0.72
NKX2-8O15522 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-8O15522 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-8O15522 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NKX2-8O15522 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.56■□□□□ 0.72
NKX2-8O15522 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-8O15522 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.56■□□□□ 0.72
NKX2-8O15522 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.56■□□□□ 0.72
NKX2-8O15522 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.56■□□□□ 0.72
NKX2-8O15522 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.56■□□□□ 0.72
NKX2-8O15522 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-8O15522 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NKX2-8O15522 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-8O15522 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-8O15522 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-8O15522 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-8O15522 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-8O15522 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.55■□□□□ 0.72
NKX2-8O15522 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NKX2-8O15522 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-8O15522 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-8O15522 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.55■□□□□ 0.72
NKX2-8O15522 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-8O15522 KRT17P1-201ENST00000399211 1546 ntBASIC19.55■□□□□ 0.72
NKX2-8O15522 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-8O15522 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-8O15522 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-8O15522 UNC93B4-201ENST00000505679 747 ntBASIC19.54■□□□□ 0.72
NKX2-8O15522 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-8O15522 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-8O15522 AP003097.1-201ENST00000530657 1135 ntBASIC19.54■□□□□ 0.72
NKX2-8O15522 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NKX2-8O15522 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-8O15522 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX2-8O15522 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.53■□□□□ 0.72
NKX2-8O15522 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-8O15522 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-8O15522 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-8O15522 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-8O15522 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX2-8O15522 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-8O15522 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.53■□□□□ 0.72
NKX2-8O15522 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX2-8O15522 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.53■□□□□ 0.72
NKX2-8O15522 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.53■□□□□ 0.72
NKX2-8O15522 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.53■□□□□ 0.72
NKX2-8O15522 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NKX2-8O15522 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
NKX2-8O15522 AC003102.1-202ENST00000563394 1796 ntBASIC19.52■□□□□ 0.72
NKX2-8O15522 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
NKX2-8O15522 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-8O15522 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-8O15522 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NKX2-8O15522 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-8O15522 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.52■□□□□ 0.72
NKX2-8O15522 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-8O15522 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NKX2-8O15522 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-8O15522 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
NKX2-8O15522 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.52■□□□□ 0.72
NKX2-8O15522 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NKX2-8O15522 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-8O15522 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-8O15522 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-8O15522 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-8O15522 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NKX2-8O15522 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-8O15522 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX2-8O15522 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
NKX2-8O15522 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-8O15522 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.51■□□□□ 0.71
NKX2-8O15522 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-8O15522 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms