Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMAD9O15198 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD9O15198 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD9O15198 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.08■□□□□ 0.64
SMAD9O15198 AC034268.1-201ENST00000441047 882 ntBASIC19.08■□□□□ 0.64
SMAD9O15198 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD9O15198 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD9O15198 MIR5787-201ENST00000611784 55 ntBASIC19.08■□□□□ 0.64
SMAD9O15198 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.08■□□□□ 0.64
SMAD9O15198 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.08■□□□□ 0.64
SMAD9O15198 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.08■□□□□ 0.64
SMAD9O15198 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD9O15198 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMAD9O15198 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.07■□□□□ 0.64
SMAD9O15198 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.07■□□□□ 0.64
SMAD9O15198 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD9O15198 C11orf96-202ENST00000528572 1834 ntBASIC19.07■□□□□ 0.64
SMAD9O15198 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SMAD9O15198 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.07■□□□□ 0.64
SMAD9O15198 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.07■□□□□ 0.64
SMAD9O15198 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.07■□□□□ 0.64
SMAD9O15198 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.07■□□□□ 0.64
SMAD9O15198 AC079140.4-201ENST00000507448 529 ntBASIC19.07■□□□□ 0.64
SMAD9O15198 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.07■□□□□ 0.64
SMAD9O15198 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SMAD9O15198 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.07■□□□□ 0.64
SMAD9O15198 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD9O15198 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD9O15198 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMAD9O15198 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMAD9O15198 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.06■□□□□ 0.64
SMAD9O15198 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SMAD9O15198 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.06■□□□□ 0.64
SMAD9O15198 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SMAD9O15198 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.06■□□□□ 0.64
SMAD9O15198 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.06■□□□□ 0.64
SMAD9O15198 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.06■□□□□ 0.64
SMAD9O15198 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.06■□□□□ 0.64
SMAD9O15198 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMAD9O15198 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
SMAD9O15198 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.05■□□□□ 0.64
SMAD9O15198 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.05■□□□□ 0.64
SMAD9O15198 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.05■□□□□ 0.64
SMAD9O15198 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.05■□□□□ 0.64
SMAD9O15198 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.05■□□□□ 0.64
SMAD9O15198 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.05■□□□□ 0.64
SMAD9O15198 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.05■□□□□ 0.64
SMAD9O15198 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.05■□□□□ 0.64
SMAD9O15198 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD9O15198 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SMAD9O15198 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.04■□□□□ 0.64
SMAD9O15198 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMAD9O15198 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.04■□□□□ 0.64
SMAD9O15198 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.04■□□□□ 0.64
SMAD9O15198 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD9O15198 AC003102.1-202ENST00000563394 1796 ntBASIC19.04■□□□□ 0.64
SMAD9O15198 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD9O15198 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD9O15198 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD9O15198 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMAD9O15198 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.03■□□□□ 0.64
SMAD9O15198 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SMAD9O15198 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD9O15198 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.03■□□□□ 0.64
SMAD9O15198 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.03■□□□□ 0.64
SMAD9O15198 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.03■□□□□ 0.64
SMAD9O15198 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SMAD9O15198 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms