Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TO15178 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TO15178 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TO15178 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.46■□□□□ 0.71
TO15178 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TO15178 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.46■□□□□ 0.71
TO15178 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.46■□□□□ 0.71
TO15178 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TO15178 AP001160.3-201ENST00000601484 763 ntBASIC19.46■□□□□ 0.71
TO15178 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TO15178 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TO15178 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 POU5F1P4-201ENST00000413175 1085 ntBASIC19.45■□□□□ 0.7
TO15178 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.45■□□□□ 0.7
TO15178 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TO15178 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TO15178 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
TO15178 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TO15178 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TO15178 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
TO15178 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.44■□□□□ 0.7
TO15178 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.44■□□□□ 0.7
TO15178 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.44■□□□□ 0.7
TO15178 KRT18P20-201ENST00000548986 1279 ntBASIC19.44■□□□□ 0.7
TO15178 AC008175.2-201ENST00000612840 297 ntBASIC19.44■□□□□ 0.7
TO15178 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TO15178 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TO15178 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TO15178 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.43■□□□□ 0.7
TO15178 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TO15178 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TO15178 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.42■□□□□ 0.7
TO15178 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.42■□□□□ 0.7
TO15178 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.42■□□□□ 0.7
TO15178 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.42■□□□□ 0.7
TO15178 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TO15178 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TO15178 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.41■□□□□ 0.7
TO15178 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TO15178 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TO15178 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.41■□□□□ 0.7
TO15178 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.41■□□□□ 0.7
TO15178 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TO15178 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TO15178 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TO15178 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TO15178 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TO15178 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TO15178 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TO15178 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.4■□□□□ 0.7
TO15178 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.4■□□□□ 0.7
TO15178 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.4■□□□□ 0.7
TO15178 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.4■□□□□ 0.7
TO15178 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.4■□□□□ 0.7
TO15178 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.4■□□□□ 0.7
TO15178 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.4■□□□□ 0.7
TO15178 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.4■□□□□ 0.7
TO15178 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
TO15178 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms