Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AC079834.2-201ENST00000609776 1949 ntBASIC18.95■□□□□ 0.62
TNFSF11O14788 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFSF11O14788 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF11O14788 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFSF11O14788 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF11O14788 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF11O14788 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF11O14788 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.94■□□□□ 0.62
TNFSF11O14788 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFSF11O14788 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 AC008175.2-201ENST00000612840 297 ntBASIC18.94■□□□□ 0.62
TNFSF11O14788 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TNFSF11O14788 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF11O14788 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFSF11O14788 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TNFSF11O14788 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.93■□□□□ 0.62
TNFSF11O14788 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.93■□□□□ 0.62
TNFSF11O14788 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 AC004911.1-201ENST00000416316 871 ntBASIC18.93■□□□□ 0.62
TNFSF11O14788 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF11O14788 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.93■□□□□ 0.62
TNFSF11O14788 UBE2DNL-204ENST00000602536 740 ntBASIC18.93■□□□□ 0.62
TNFSF11O14788 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF11O14788 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF11O14788 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFSF11O14788 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF11O14788 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF11O14788 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TNFSF11O14788 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNFSF11O14788 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNFSF11O14788 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF11O14788 AC006015.1-201ENST00000429970 570 ntBASIC18.92■□□□□ 0.62
TNFSF11O14788 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF11O14788 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF11O14788 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF11O14788 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF11O14788 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF11O14788 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF11O14788 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF11O14788 LINC00565-201ENST00000562710 2331 ntBASIC18.91■□□□□ 0.62
TNFSF11O14788 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF11O14788 AC061975.6-201ENST00000579045 1553 ntBASIC18.91■□□□□ 0.62
TNFSF11O14788 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF11O14788 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.91■□□□□ 0.62
TNFSF11O14788 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.91■□□□□ 0.62
TNFSF11O14788 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF11O14788 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.91■□□□□ 0.62
TNFSF11O14788 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF11O14788 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF11O14788 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF11O14788 SLC7A5P2-201ENST00000553010 536 ntBASIC18.91■□□□□ 0.62
TNFSF11O14788 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.91■□□□□ 0.62
TNFSF11O14788 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF11O14788 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF11O14788 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNFSF11O14788 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF11O14788 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms