Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.57■□□□□ 0.88
CDX4O14627 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDX4O14627 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.57■□□□□ 0.88
CDX4O14627 AC020928.2-201ENST00000588717 2197 ntBASIC20.57■□□□□ 0.88
CDX4O14627 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.57■□□□□ 0.88
CDX4O14627 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDX4O14627 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDX4O14627 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.56■□□□□ 0.88
CDX4O14627 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CDX4O14627 KRT17P3-201ENST00000420566 1262 ntBASIC20.56■□□□□ 0.88
CDX4O14627 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDX4O14627 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.56■□□□□ 0.88
CDX4O14627 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.56■□□□□ 0.88
CDX4O14627 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CDX4O14627 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDX4O14627 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDX4O14627 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDX4O14627 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDX4O14627 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDX4O14627 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDX4O14627 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDX4O14627 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.55■□□□□ 0.88
CDX4O14627 ANOS2P-203ENST00000472227 1816 ntBASIC20.55■□□□□ 0.88
CDX4O14627 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.55■□□□□ 0.88
CDX4O14627 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDX4O14627 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDX4O14627 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.55■□□□□ 0.88
CDX4O14627 LINC01023-201ENST00000606054 436 ntBASIC20.55■□□□□ 0.88
CDX4O14627 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.55■□□□□ 0.88
CDX4O14627 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.55■□□□□ 0.88
CDX4O14627 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDX4O14627 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDX4O14627 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDX4O14627 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDX4O14627 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDX4O14627 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.55■□□□□ 0.88
CDX4O14627 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
CDX4O14627 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.55■□□□□ 0.88
CDX4O14627 AC061975.6-201ENST00000579045 1553 ntBASIC20.55■□□□□ 0.88
CDX4O14627 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDX4O14627 AC092068.2-201ENST00000590491 1708 ntBASIC20.54■□□□□ 0.88
CDX4O14627 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDX4O14627 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDX4O14627 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.54■□□□□ 0.88
CDX4O14627 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.54■□□□□ 0.88
CDX4O14627 PNMA6B-201ENST00000538162 1200 ntBASIC20.54■□□□□ 0.88
CDX4O14627 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDX4O14627 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDX4O14627 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDX4O14627 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDX4O14627 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.53■□□□□ 0.88
CDX4O14627 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.53■□□□□ 0.88
CDX4O14627 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CDX4O14627 AC233263.1-201ENST00000578059 224 ntBASIC20.53■□□□□ 0.88
CDX4O14627 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.53■□□□□ 0.88
CDX4O14627 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CDX4O14627 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDX4O14627 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.52■□□□□ 0.88
CDX4O14627 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CDX4O14627 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.52■□□□□ 0.88
CDX4O14627 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.52■□□□□ 0.88
CDX4O14627 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 AC100791.3-201ENST00000617619 330 ntBASIC20.52■□□□□ 0.88
CDX4O14627 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDX4O14627 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDX4O14627 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDX4O14627 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.52■□□□□ 0.88
CDX4O14627 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CDX4O14627 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDX4O14627 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDX4O14627 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDX4O14627 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDX4O14627 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDX4O14627 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDX4O14627 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDX4O14627 KRT18P21-201ENST00000515767 1272 ntBASIC20.51■□□□□ 0.87
CDX4O14627 FAM21FP-204ENST00000608637 956 ntBASIC20.51■□□□□ 0.87
CDX4O14627 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.51■□□□□ 0.87
CDX4O14627 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDX4O14627 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDX4O14627 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms