Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UPK3BL1B0FP48 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.32■■□□□ 1
UPK3BL1B0FP48 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
UPK3BL1B0FP48 AC069152.1-201ENST00000438030 544 ntBASIC21.32■■□□□ 1
UPK3BL1B0FP48 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.32■■□□□ 1
UPK3BL1B0FP48 AC010141.2-201ENST00000452426 721 ntBASIC21.32■■□□□ 1
UPK3BL1B0FP48 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UPK3BL1B0FP48 AC133041.1-202ENST00000642053 222 ntBASIC21.32■■□□□ 1
UPK3BL1B0FP48 AC003102.1-202ENST00000563394 1796 ntBASIC21.32■■□□□ 1
UPK3BL1B0FP48 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UPK3BL1B0FP48 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.32■■□□□ 1
UPK3BL1B0FP48 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.32■■□□□ 1
UPK3BL1B0FP48 ECEL1P1-201ENST00000373592 1742 ntBASIC21.32■■□□□ 1
UPK3BL1B0FP48 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
UPK3BL1B0FP48 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 AL138781.1-201ENST00000566567 1274 ntBASIC21.31■■□□□ 1
UPK3BL1B0FP48 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
UPK3BL1B0FP48 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPK3BL1B0FP48 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK3BL1B0FP48 EP400NL-214ENST00000641289 2402 ntBASIC21.3■■□□□ 1
UPK3BL1B0FP48 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
UPK3BL1B0FP48 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK3BL1B0FP48 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPK3BL1B0FP48 AC026471.6-201ENST00000622954 1905 ntBASIC21.3■■□□□ 1
UPK3BL1B0FP48 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.3■■□□□ 1
UPK3BL1B0FP48 MIR4651-201ENST00000582622 73 ntBASIC21.3■■□□□ 1
UPK3BL1B0FP48 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK3BL1B0FP48 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.3■■□□□ 1
UPK3BL1B0FP48 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
UPK3BL1B0FP48 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPK3BL1B0FP48 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK3BL1B0FP48 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.29■■□□□ 1
UPK3BL1B0FP48 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.29■■□□□ 1
UPK3BL1B0FP48 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.29■■□□□ 1
UPK3BL1B0FP48 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.29■■□□□ 1
UPK3BL1B0FP48 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.29■■□□□ 1
UPK3BL1B0FP48 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.29■■□□□ 1
UPK3BL1B0FP48 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.29■■□□□ 1
UPK3BL1B0FP48 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK3BL1B0FP48 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.28■■□□□ 1
UPK3BL1B0FP48 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
UPK3BL1B0FP48 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.28■■□□□ 1
UPK3BL1B0FP48 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
UPK3BL1B0FP48 AC093827.2-201ENST00000512654 315 ntBASIC21.28■■□□□ 1
UPK3BL1B0FP48 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.28■■□□□ 1
UPK3BL1B0FP48 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.28■■□□□ 1
UPK3BL1B0FP48 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPK3BL1B0FP48 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.28■■□□□ 1
UPK3BL1B0FP48 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UPK3BL1B0FP48 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.27■■□□□ 1
UPK3BL1B0FP48 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UPK3BL1B0FP48 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UPK3BL1B0FP48 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.27■■□□□ 1
UPK3BL1B0FP48 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.27■■□□□ 1
UPK3BL1B0FP48 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
UPK3BL1B0FP48 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.27■■□□□ 1
UPK3BL1B0FP48 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.27■■□□□ 1
UPK3BL1B0FP48 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
UPK3BL1B0FP48 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
UPK3BL1B0FP48 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UPK3BL1B0FP48 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.27■■□□□ 1
UPK3BL1B0FP48 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
UPK3BL1B0FP48 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms