Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 LINC01960-201ENST00000563759 1884 ntBASIC16.29■□□□□ 0.2
COLCA2A8K830 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COLCA2A8K830 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COLCA2A8K830 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA2A8K830 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COLCA2A8K830 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA2A8K830 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA2A8K830 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA2A8K830 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.29■□□□□ 0.2
COLCA2A8K830 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COLCA2A8K830 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
COLCA2A8K830 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COLCA2A8K830 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA2A8K830 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.27■□□□□ 0.2
COLCA2A8K830 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.27■□□□□ 0.2
COLCA2A8K830 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 AC099778.1-201ENST00000568593 1911 ntBASIC16.27■□□□□ 0.2
COLCA2A8K830 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.27■□□□□ 0.2
COLCA2A8K830 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC16.27■□□□□ 0.2
COLCA2A8K830 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.27■□□□□ 0.2
COLCA2A8K830 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.27■□□□□ 0.2
COLCA2A8K830 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
COLCA2A8K830 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA2A8K830 AP000997.3-201ENST00000623333 2250 ntBASIC16.27■□□□□ 0.2
COLCA2A8K830 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
COLCA2A8K830 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COLCA2A8K830 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
COLCA2A8K830 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.26■□□□□ 0.19
COLCA2A8K830 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA2A8K830 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA2A8K830 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA2A8K830 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COLCA2A8K830 AC005559.1-201ENST00000589661 871 ntBASIC16.26■□□□□ 0.19
COLCA2A8K830 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COLCA2A8K830 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.26■□□□□ 0.19
COLCA2A8K830 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA2A8K830 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA2A8K830 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA2A8K830 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA2A8K830 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.25■□□□□ 0.19
COLCA2A8K830 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 PCDHB18P-201ENST00000524813 2368 ntBASIC16.25■□□□□ 0.19
COLCA2A8K830 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.25■□□□□ 0.19
COLCA2A8K830 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COLCA2A8K830 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.25■□□□□ 0.19
COLCA2A8K830 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA2A8K830 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms