Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHISA3A0PJX4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 Z92544.1-202ENST00000571933 1220 ntBASIC18.42■□□□□ 0.54
SHISA3A0PJX4 AC092028.1-203ENST00000608262 953 ntBASIC18.42■□□□□ 0.54
SHISA3A0PJX4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHISA3A0PJX4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.41■□□□□ 0.54
SHISA3A0PJX4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 AC087289.5-201ENST00000586076 3175 ntBASIC18.4■□□□□ 0.54
SHISA3A0PJX4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHISA3A0PJX4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHISA3A0PJX4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHISA3A0PJX4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 AC006455.2-201ENST00000429931 906 ntBASIC18.39■□□□□ 0.53
SHISA3A0PJX4 BX664725.1-201ENST00000438252 379 ntBASIC18.39■□□□□ 0.53
SHISA3A0PJX4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHISA3A0PJX4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHISA3A0PJX4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 AC020907.5-201ENST00000624372 1936 ntBASIC18.37■□□□□ 0.53
SHISA3A0PJX4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SHISA3A0PJX4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms