Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AC004911.1-201ENST00000416316 871 ntBASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SMUG1P1-201ENST00000590640 811 ntBASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV4S1A1TA0A5B7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV4S1A1TA0A5B7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TPRG1LP1-201ENST00000598702 760 ntBASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 RARRES2P11-201ENST00000635158 484 ntBASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AC090192.1-201ENST00000517740 490 ntBASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRBV4S1A1TA0A5B7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.89■□□□□ 0.3
TCRBV4S1A1TA0A5B7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC016769.1-201ENST00000409132 1010 ntBASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms