Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-5A0A0J9YX44 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 SERBP1P1-201ENST00000396021 1160 ntBASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-5A0A0J9YX44 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 SLC47A1P1-202ENST00000449666 945 ntBASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 AC136469.2-201ENST00000623944 1028 ntBASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-5A0A0J9YX44 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-5A0A0J9YX44 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV5-5A0A0J9YX44 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV5-5A0A0J9YX44 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.27■□□□□ 0.51
TRBV5-5A0A0J9YX44 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.27■□□□□ 0.51
TRBV5-5A0A0J9YX44 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 AC011298.3-201ENST00000615796 283 ntBASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV5-5A0A0J9YX44 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms