Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC026471.6-201ENST00000622954 1905 ntBASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC073111.5-205ENST00000641717 521 ntBASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 MYCNOS-205ENST00000641950 531 ntBASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV4-28A0A0C4DH34 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 MFSD11-216ENST00000590393 1141 ntBASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC008175.2-201ENST00000612840 297 ntBASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.22■□□□□ 0.03
IGHV4-28A0A0C4DH34 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 KRT18P20-201ENST00000548986 1279 ntBASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC010542.4-201ENST00000563151 1910 ntBASIC15.21■□□□□ 0.02
IGHV4-28A0A0C4DH34 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IGHV4-28A0A0C4DH34 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
IGHV4-28A0A0C4DH34 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
IGHV4-28A0A0C4DH34 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
IGHV4-28A0A0C4DH34 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 CDCA4P2-201ENST00000441182 718 ntBASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC120498.10-201ENST00000621827 505 ntBASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV4-28A0A0C4DH34 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms