Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 AL137784.2-201ENST00000607332 1000 ntBASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 KRT16P2-201ENST00000414673 1423 ntBASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 AC026471.6-201ENST00000622954 1905 ntBASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 AC006015.1-201ENST00000429970 570 ntBASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV25A0A0B4J276 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV25A0A0B4J276 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRAV25A0A0B4J276 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRAV25A0A0B4J276 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
TRAV25A0A0B4J276 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRAV25A0A0B4J276 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV25A0A0B4J276 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
TRAV25A0A0B4J276 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 AC092666.2-201ENST00000613287 246 ntBASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV25A0A0B4J276 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV25A0A0B4J276 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms