Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.85■□□□□ 0.45
TRAV20A0A0B4J274 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV20A0A0B4J274 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV20A0A0B4J274 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TRAV20A0A0B4J274 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 AC073111.5-205ENST00000641717 521 ntBASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 AC092068.2-201ENST00000590491 1708 ntBASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 AC005224.4-201ENST00000583262 1652 ntBASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV20A0A0B4J274 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 ANOS2P-203ENST00000472227 1816 ntBASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 AC026185.1-201ENST00000445748 174 ntBASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 KRT87P-202ENST00000534226 1464 ntBASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
TRAV20A0A0B4J274 AC233723.2-201ENST00000623798 2106 ntBASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 CDCA4P2-201ENST00000441182 718 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms