Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 AL451085.2-201ENST00000605085 799 ntBASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 AL031602.1-201ENST00000633169 911 ntBASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV13-1A0A0B4J241 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 pRNA.6-201ENST00000610482 90 ntBASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 pRNA.5-201ENST00000612139 90 ntBASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 pRNA.11-201ENST00000618423 90 ntBASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 pRNA.13-201ENST00000619112 90 ntBASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV13-1A0A0B4J241 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV13-1A0A0B4J241 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 MIR6724-1-201ENST00000616420 92 ntBASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 MIR6724-2-201ENST00000616483 92 ntBASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 MIR6724-4-201ENST00000617390 92 ntBASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 MIR6724-3-201ENST00000622482 92 ntBASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 AC087239.1-201ENST00000622671 572 ntBASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV13-1A0A0B4J241 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms