Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 AC126544.1-201ENST00000580842 1059 ntBASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.52■□□□□ 0.24
TRAV30A0A087WSZ9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV30A0A087WSZ9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV30A0A087WSZ9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
TRAV30A0A087WSZ9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV30A0A087WSZ9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 AP006587.3-201ENST00000525742 1516 ntBASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 MIR4767-201ENST00000582827 78 ntBASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 AC003102.1-202ENST00000563394 1796 ntBASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV30A0A087WSZ9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 AL136162.1-201ENST00000607711 1078 ntBASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV30A0A087WSZ9 AC135279.3-201ENST00000610945 1311 ntBASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV30A0A087WSZ9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 AC005229.4-201ENST00000610085 2198 ntBASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 AC009237.3-201ENST00000393279 1427 ntBASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 IGHV3-19-201ENST00000521488 291 ntBASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 AC133561.4-201ENST00000566112 224 ntBASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 SMUG1P1-201ENST00000590640 811 ntBASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV30A0A087WSZ9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms