Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 AL162430.1-201ENST00000480705 870 ntBASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCA3PQ9Y6N3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 NTF6G-201ENST00000591094 616 ntBASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLCA3PQ9Y6N3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 AL137060.1-201ENST00000618151 2648 ntBASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCA3PQ9Y6N3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 FAM99A-202ENST00000538190 1989 ntBASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 KRT87P-202ENST00000534226 1464 ntBASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCA3PQ9Y6N3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 KRT18P5-201ENST00000436075 1291 ntBASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCA3PQ9Y6N3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms