Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA9Q9Y5G4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA9Q9Y5G4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA9Q9Y5G4 AL024507.2-201ENST00000606070 2574 ntBASIC19.77■□□□□ 0.75
PCDHGA9Q9Y5G4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA9Q9Y5G4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 AC105036.2-201ENST00000569468 176 ntBASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA9Q9Y5G4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 FAM201B-201ENST00000458407 597 ntBASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 AC013268.1-206ENST00000638368 961 ntBASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 AC112229.1-201ENST00000639295 961 ntBASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA9Q9Y5G4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA9Q9Y5G4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA9Q9Y5G4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 AL034346.1-201ENST00000568244 1277 ntBASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 MIR4758-201ENST00000577688 71 ntBASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 MIR4651-201ENST00000582622 73 ntBASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA9Q9Y5G4 AP004607.7-201ENST00000527152 1677 ntBASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms