Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGB1Q9Y5G3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 AC026471.6-201ENST00000622954 1905 ntBASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGB1Q9Y5G3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB1Q9Y5G3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 AC009102.2-201ENST00000606772 1639 ntBASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGB1Q9Y5G3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 BX664725.1-201ENST00000438252 379 ntBASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGB1Q9Y5G3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB1Q9Y5G3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms