Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC4Q9Y5F7 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC4Q9Y5F7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 KRT19P1-201ENST00000405746 1186 ntBASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC4Q9Y5F7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 AC022517.1-201ENST00000592429 346 ntBASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGC4Q9Y5F7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 AC138907.5-202ENST00000569484 235 ntBASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 AP001160.3-201ENST00000601484 763 ntBASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC4Q9Y5F7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGC4Q9Y5F7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms