Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.43■■□□□ 1.02
SIT1Q9Y3P8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIT1Q9Y3P8 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.43■■□□□ 1.02
SIT1Q9Y3P8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.43■■□□□ 1.02
SIT1Q9Y3P8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.43■■□□□ 1.02
SIT1Q9Y3P8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIT1Q9Y3P8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 KRT17P3-201ENST00000420566 1262 ntBASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 HLA-B-256ENST00000639848 1089 ntBASIC21.42■■□□□ 1.02
SIT1Q9Y3P8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 CYP2T3P-201ENST00000601990 817 ntBASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 Z99916.2-201ENST00000604037 246 ntBASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 AC010331.1-201ENST00000611423 582 ntBASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SIT1Q9Y3P8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 KRT17P1-201ENST00000399211 1546 ntBASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 SNORA78-201ENST00000459373 127 ntBASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.4■■□□□ 1.02
SIT1Q9Y3P8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.39■■□□□ 1.02
SIT1Q9Y3P8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SIT1Q9Y3P8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SIT1Q9Y3P8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SIT1Q9Y3P8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 LINC01023-201ENST00000606054 436 ntBASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIT1Q9Y3P8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 AL355472.2-201ENST00000422958 438 ntBASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 RN7SL471P-201ENST00000580476 299 ntBASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.38■■□□□ 1.01
SIT1Q9Y3P8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.37■■□□□ 1.01
SIT1Q9Y3P8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
SIT1Q9Y3P8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms