Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 KRT18P29-201ENST00000397031 1267 ntBASIC27.78■■■□□ 2.04
SPG7Q9UQ90 AC097658.1-201ENST00000475555 843 ntBASIC27.78■■■□□ 2.04
SPG7Q9UQ90 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 RARRES2P4-201ENST00000514074 484 ntBASIC27.78■■■□□ 2.04
SPG7Q9UQ90 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 RHEB-204ENST00000472642 900 ntTSL 3 BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SPG7Q9UQ90 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.77■■■□□ 2.04
SPG7Q9UQ90 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SPG7Q9UQ90 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SPG7Q9UQ90 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 AC003102.1-202ENST00000563394 1796 ntBASIC27.74■■■□□ 2.03
SPG7Q9UQ90 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SPG7Q9UQ90 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 AC091874.3-201ENST00000512672 1195 ntBASIC27.73■■■□□ 2.03
SPG7Q9UQ90 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 BET1L-207ENST00000529614 560 ntTSL 5 BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SPG7Q9UQ90 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 PRORSD1P-201ENST00000295112 541 ntBASIC27.72■■■□□ 2.03
SPG7Q9UQ90 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.72■■■□□ 2.03
SPG7Q9UQ90 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC27.71■■■□□ 2.03
SPG7Q9UQ90 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.7■■■□□ 2.03
SPG7Q9UQ90 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.7■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms