Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 AC010980.2-201ENST00000587099 1412 ntBASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.74■■■□□ 2.67
SHANK2Q9UPX8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC31.73■■■□□ 2.67
SHANK2Q9UPX8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 AC092053.2-201ENST00000640557 1818 ntBASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 POU5F1P3-201ENST00000428824 1078 ntBASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 AC008694.1-202ENST00000636953 945 ntBASIC31.72■■■□□ 2.67
SHANK2Q9UPX8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
SHANK2Q9UPX8 BX276092.2-201ENST00000417668 665 ntBASIC31.71■■■□□ 2.67
SHANK2Q9UPX8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.71■■■□□ 2.67
SHANK2Q9UPX8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC31.71■■■□□ 2.67
SHANK2Q9UPX8 AL591742.1-201ENST00000604433 565 ntBASIC31.71■■■□□ 2.67
SHANK2Q9UPX8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SHANK2Q9UPX8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
SHANK2Q9UPX8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SHANK2Q9UPX8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
SHANK2Q9UPX8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SHANK2Q9UPX8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SHANK2Q9UPX8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 AC080038.3-201ENST00000623346 1952 ntBASIC31.7■■■□□ 2.66
SHANK2Q9UPX8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC31.69■■■□□ 2.66
SHANK2Q9UPX8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SHANK2Q9UPX8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 AC091874.3-201ENST00000512672 1195 ntBASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC31.67■■■□□ 2.66
SHANK2Q9UPX8 PRORSD1P-201ENST00000295112 541 ntBASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 AC091799.1-201ENST00000422823 811 ntBASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SHANK2Q9UPX8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 RNA5SP413-201ENST00000516373 109 ntBASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SHANK2Q9UPX8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms