Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
HDAC6Q9UBN7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.89■■□□□ 1.42
HDAC6Q9UBN7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HDAC6Q9UBN7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HDAC6Q9UBN7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HDAC6Q9UBN7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
HDAC6Q9UBN7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
HDAC6Q9UBN7 AC083906.2-201ENST00000511578 360 ntBASIC23.89■■□□□ 1.41
HDAC6Q9UBN7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HDAC6Q9UBN7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.89■■□□□ 1.41
HDAC6Q9UBN7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
HDAC6Q9UBN7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.89■■□□□ 1.41
HDAC6Q9UBN7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HDAC6Q9UBN7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
HDAC6Q9UBN7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.88■■□□□ 1.41
HDAC6Q9UBN7 AC005181.1-201ENST00000604782 1256 ntBASIC23.88■■□□□ 1.41
HDAC6Q9UBN7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HDAC6Q9UBN7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HDAC6Q9UBN7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 AL137060.1-201ENST00000618151 2648 ntBASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 ABHD17AP1-201ENST00000358206 933 ntBASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 AC242852.2-201ENST00000615738 1807 ntBASIC23.87■■□□□ 1.41
HDAC6Q9UBN7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 TSPY6P-201ENST00000448518 926 ntBASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 AC142086.2-201ENST00000569753 217 ntBASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.86■■□□□ 1.41
HDAC6Q9UBN7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HDAC6Q9UBN7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.85■■□□□ 1.41
HDAC6Q9UBN7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
HDAC6Q9UBN7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HDAC6Q9UBN7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HDAC6Q9UBN7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 GUSBP6-202ENST00000438529 1198 ntBASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 AC010141.2-201ENST00000452426 721 ntBASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 SLC7A5P2-201ENST00000553010 536 ntBASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 AC138907.5-202ENST00000569484 235 ntBASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 OR7E47P-201ENST00000546390 1422 ntBASIC23.84■■□□□ 1.41
HDAC6Q9UBN7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HDAC6Q9UBN7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.83■■□□□ 1.4
HDAC6Q9UBN7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.82■■□□□ 1.4
HDAC6Q9UBN7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
HDAC6Q9UBN7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HDAC6Q9UBN7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms