Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ECHDC1Q9NTX5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ECHDC1Q9NTX5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 Z98882.1-201ENST00000622160 2253 ntBASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 AC104187.1-201ENST00000607510 612 ntBASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ECHDC1Q9NTX5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 NTF6G-201ENST00000591094 616 ntBASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 MIR5787-201ENST00000611784 55 ntBASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ECHDC1Q9NTX5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.81■■□□□ 1.72
ECHDC1Q9NTX5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 AC138907.5-202ENST00000569484 235 ntBASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ECHDC1Q9NTX5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 KRT18P5-201ENST00000436075 1291 ntBASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ECHDC1Q9NTX5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms