Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 AP004607.7-201ENST00000527152 1677 ntBASIC20.04■□□□□ 0.8
NANOGQ9H9S0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.03■□□□□ 0.8
NANOGQ9H9S0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NANOGQ9H9S0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NANOGQ9H9S0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
NANOGQ9H9S0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NANOGQ9H9S0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
NANOGQ9H9S0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
NANOGQ9H9S0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NANOGQ9H9S0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
NANOGQ9H9S0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 KRT16P3-201ENST00000439127 1283 ntBASIC20.01■□□□□ 0.79
NANOGQ9H9S0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.01■□□□□ 0.79
NANOGQ9H9S0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20■□□□□ 0.79
NANOGQ9H9S0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NANOGQ9H9S0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20■□□□□ 0.79
NANOGQ9H9S0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20■□□□□ 0.79
NANOGQ9H9S0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20■□□□□ 0.79
NANOGQ9H9S0 AL356740.2-201ENST00000601559 647 ntBASIC20■□□□□ 0.79
NANOGQ9H9S0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NANOGQ9H9S0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20■□□□□ 0.79
NANOGQ9H9S0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NANOGQ9H9S0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NANOGQ9H9S0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGQ9H9S0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.99■□□□□ 0.79
NANOGQ9H9S0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 AL391422.3-201ENST00000603791 2761 ntBASIC19.99■□□□□ 0.79
NANOGQ9H9S0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
NANOGQ9H9S0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms