Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 UNC93B5-201ENST00000530315 699 ntBASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTFDC1Q9BY42 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 AC142381.4-202ENST00000563973 229 ntBASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.89■■□□□ 1.74
RTFDC1Q9BY42 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTFDC1Q9BY42 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTFDC1Q9BY42 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.89■■□□□ 1.73
RTFDC1Q9BY42 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
RTFDC1Q9BY42 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 AL596275.1-201ENST00000423464 877 ntBASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 AC026366.1-201ENST00000488803 879 ntBASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 AC087742.1-201ENST00000575880 1738 ntBASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTFDC1Q9BY42 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTFDC1Q9BY42 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 AL158047.1-201ENST00000445918 881 ntBASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.86■■□□□ 1.73
RTFDC1Q9BY42 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 AC061975.6-201ENST00000579045 1553 ntBASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
RTFDC1Q9BY42 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTFDC1Q9BY42 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms