Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF4Q9BUZ4 AC080038.3-201ENST00000623346 1952 ntBASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 AL137784.2-201ENST00000607332 1000 ntBASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF4Q9BUZ4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 AC079630.1-202ENST00000618127 1840 ntBASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF4Q9BUZ4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 RARRES2P11-201ENST00000635158 484 ntBASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF4Q9BUZ4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 NTF6G-201ENST00000591094 616 ntBASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 AC092437.1-201ENST00000624794 1048 ntBASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF4Q9BUZ4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF4Q9BUZ4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF4Q9BUZ4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF4Q9BUZ4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms