Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC026396.1-201ENST00000419388 421 ntBASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 MTDHP1-201ENST00000605323 784 ntBASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 AL023875.1-201ENST00000640777 796 ntBASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN3Q9BTN0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 AC006557.6-201ENST00000623071 864 ntBASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.42■■□□□ 1.02
LRFN3Q9BTN0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN3Q9BTN0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 AC026471.5-201ENST00000615068 467 ntBASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.4■■□□□ 1.02
LRFN3Q9BTN0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LRFN3Q9BTN0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LRFN3Q9BTN0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.39■■□□□ 1.02
LRFN3Q9BTN0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.39■■□□□ 1.02
LRFN3Q9BTN0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
LRFN3Q9BTN0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LRFN3Q9BTN0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 UPK3BP1-201ENST00000428678 509 ntBASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 DUX4L26-201ENST00000489078 1255 ntBASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 AP003071.4-201ENST00000562276 1284 ntBASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 AC110285.5-201ENST00000611501 352 ntBASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRFN3Q9BTN0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 AC113347.1-201ENST00000413321 391 ntBASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 AC239809.2-201ENST00000415381 517 ntBASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 RARRES2P10-201ENST00000564312 460 ntBASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 AC008175.2-201ENST00000612840 297 ntBASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LRFN3Q9BTN0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms